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DIFFERENTIAL BINDING OF INHIBITORS TO ACTIVE AND INACTIVE CDK2 PROVIDES INSIGHTS FOR DRUG DESIGN
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.6 277 PEG 3350, NAF, PH 7.0, VAPOUR DIFFUSION, HANGING DROP, TEMPERATURE 277K
Crystal Properties Matthews coefficient Solvent content 1.84 32.54
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 53.274 α = 90 b = 70.893 β = 90 c = 71.745 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS IV MIRRORS 2005-03-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU FR-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 19.8 98.3 0.1 5.7 2.47 21637 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.97 99.1 0.51 1.8 2.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 2.25 12 12610 424 97.9 0.172 0.168 0.1707 0.295 0.2954 RANDOM 47.76
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.75 -0.25 -0.5
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 9.886 r_scangle_it 8.542 r_scbond_it 6.302 r_mcangle_it 4.071 r_angle_refined_deg 2.789 r_mcbond_it 2.632 r_nbd_refined 0.328 r_symmetry_hbond_refined 0.285 r_xyhbond_nbd_refined 0.284 r_symmetry_vdw_refined 0.279
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 9.886 r_scangle_it 8.542 r_scbond_it 6.302 r_mcangle_it 4.071 r_angle_refined_deg 2.789 r_mcbond_it 2.632 r_nbd_refined 0.328 r_symmetry_hbond_refined 0.285 r_xyhbond_nbd_refined 0.284 r_symmetry_vdw_refined 0.279 r_chiral_restr 0.213 r_gen_planes_refined 0.017 r_bond_refined_d 0.012 r_bond_other_d r_angle_other_deg r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_gen_planes_other r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2330 Nucleic Acid Atoms Solvent Atoms 258 Heterogen Atoms 28
Software Software Software Name Purpose REFMAC refinement CrystalClear data reduction CrystalClear data scaling