☰ Navigation Tabs
Structure of the C-terminal receptor-binding domain of avian reovirus fibre sigmaC, Zn crystal form.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.5 100 MM TRIS-HCL PH 8.5, 1.5 M AMMONIUM SULPHATE, 12% GLYCEROL, 10 MM ZINC SULPHATE
Crystal Properties Matthews coefficient Solvent content 3.2 0.61
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 74.777 α = 90 b = 74.777 β = 90 c = 74.639 γ = 120
Symmetry Space Group P 3 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH TOROIDAL MIRROR 2004-12-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM16 1.28191,1.15872, 1.28271, 1.28194 ESRF BM16
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 30 98.7 0.07 7.3 7.8 14231 28.27
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.21 97.7 0.29 2.6 8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.1 74.54 12815 1416 98.1 0.167 0.161 0.1593 0.223 0.2213 RANDOM 25.93
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.97 0.49 0.97 -1.46
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.205 r_dihedral_angle_4_deg 23.996 r_dihedral_angle_3_deg 13.922 r_dihedral_angle_1_deg 7.995 r_scangle_it 7.376 r_scbond_it 5.314 r_mcangle_it 3.356 r_mcbond_it 2.142 r_angle_refined_deg 1.75 r_nbtor_refined 0.299
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.205 r_dihedral_angle_4_deg 23.996 r_dihedral_angle_3_deg 13.922 r_dihedral_angle_1_deg 7.995 r_scangle_it 7.376 r_scbond_it 5.314 r_mcangle_it 3.356 r_mcbond_it 2.142 r_angle_refined_deg 1.75 r_nbtor_refined 0.299 r_nbd_refined 0.197 r_symmetry_vdw_refined 0.16 r_symmetry_hbond_refined 0.154 r_xyhbond_nbd_refined 0.131 r_chiral_restr 0.122 r_bond_refined_d 0.015 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1326 Nucleic Acid Atoms Solvent Atoms 164 Heterogen Atoms 16
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling SHELXD phasing