X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
130 % PEG 5000 MME, 1 M SODIUM CHLORIDE,50 MM PH 4.5 SODIUM ACETATE
Crystal Properties
Matthews coefficientSolvent content
2.4649.56

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 64.132α = 90
b = 64.132β = 90
c = 63.643γ = 120
Symmetry
Space GroupP 32 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC CCDBENT MIRROR2004-12-18MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-4ESRFID14-4

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.55099.30.0516.153.624403-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.51.59980.33.673.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONOTHERTHROUGHOUT1.44528376151199.20.1510.1490.181RANDOM10.71
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.11-0.06-0.110.17
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.435
r_dihedral_angle_4_deg22.543
r_dihedral_angle_3_deg11.032
r_dihedral_angle_1_deg6.324
r_scangle_it5.24
r_scbond_it4.086
r_mcangle_it3.04
r_mcbond_it2.434
r_angle_refined_deg1.681
r_angle_other_deg1.015
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.435
r_dihedral_angle_4_deg22.543
r_dihedral_angle_3_deg11.032
r_dihedral_angle_1_deg6.324
r_scangle_it5.24
r_scbond_it4.086
r_mcangle_it3.04
r_mcbond_it2.434
r_angle_refined_deg1.681
r_angle_other_deg1.015
r_symmetry_hbond_refined0.519
r_nbd_refined0.321
r_symmetry_vdw_other0.28
r_symmetry_vdw_refined0.255
r_xyhbond_nbd_refined0.246
r_nbd_other0.232
r_nbtor_refined0.186
r_chiral_restr0.121
r_nbtor_other0.089
r_bond_refined_d0.019
r_gen_planes_refined0.009
r_bond_other_d0.007
r_gen_planes_other0.001
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms951
Nucleic Acid Atoms
Solvent Atoms143
Heterogen Atoms1

Software

Software
Software NamePurpose
XDSdata reduction
XSCALEdata scaling
SHELXDphasing
SHELXEphasing
REFMACrefinement