2BJ2
RNA LOOP-LOOP COMPLEX: THE COLE1 INVERTED LOOP SEQUENCE, NMR, MINIMIZED AVERAGE STRUCTURE
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | NOESY | H2O | 25 mM | 6.5 | 1 atm | 308 | ||
2 | DQF-COSY | H2O | 25 mM | 6.5 | 1 atm | 308 | ||
3 | 15N/14N SELECTED NOESY | H2O | 25 mM | 6.5 | 1 atm | 308 | ||
4 | 13C/12C SELECTED NOESY | H2O | 25 mM | 6.5 | 1 atm | 308 | ||
5 | HCCH-COSY | H2O | 25 mM | 6.5 | 1 atm | 308 | ||
6 | HCCH-COSY | H2O | 25 mM | 6.5 | 1 atm | 308 | ||
7 | 31P | H2O | 25 mM | 6.5 | 1 atm | 308 | ||
8 | MQHCN | H2O | 25 mM | 6.5 | 1 atm | 308 | ||
9 | 13C-HMQC | H2O | 25 mM | 6.5 | 1 atm | 308 | ||
10 | 15N-HMQC | H2O | 25 mM | 6.5 | 1 atm | 308 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITY | 500 |
2 | GE | UNITY | 600 |
3 | GE | OMEGA | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
TORSION ANGLE MOLECULAR DYNAMICS | X-PLOR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | NO EXPERIMENTAL DATA VIOLATIONS |
Conformers Calculated Total Number | 80 |
Conformers Submitted Total Number | 1 |
Representative Model | 1 (n/a) |
Additional NMR Experimental Information | |
---|---|
Details | THE STRUCTURE WAS DETERMINED USING DOUBLE AND TRIPLE RESONANCE NMR SPECTROSCOPY ON 13C, 15N LABELED RNA. |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR | 3.851 | BRUNGER |
2 | structure solution | X-PLOR |