2BJ0

Crystal Structure of AChBP from Bulinus truncatus revals the conserved structural scaffold and sites of variation in nicotinic acetylcholine receptors


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
110.50.1 M CAPS PH10.5, 0.2 M LITHIUMSULFATE, 2 M AMMONIUM SULFATE, pH 10.50
Crystal Properties
Matthews coefficientSolvent content
2.957.7

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 76.945α = 90
b = 219.018β = 90
c = 166.965γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC CCD2003-03-19MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-4ESRFID14-4

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1244.72980.13125.1935601.7
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
122.07890.771.73.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1I9B21288439464597.70.2120.210.249RANDOM34.23
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
3.91-2.11-1.8
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.107
r_dihedral_angle_4_deg25.374
r_dihedral_angle_3_deg15.954
r_dihedral_angle_1_deg7.008
r_scangle_it3.961
r_scbond_it2.478
r_mcangle_it1.846
r_angle_refined_deg1.523
r_mcbond_it1.112
r_symmetry_vdw_refined0.238
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.107
r_dihedral_angle_4_deg25.374
r_dihedral_angle_3_deg15.954
r_dihedral_angle_1_deg7.008
r_scangle_it3.961
r_scbond_it2.478
r_mcangle_it1.846
r_angle_refined_deg1.523
r_mcbond_it1.112
r_symmetry_vdw_refined0.238
r_nbd_refined0.211
r_xyhbond_nbd_refined0.159
r_symmetry_hbond_refined0.139
r_chiral_restr0.104
r_bond_refined_d0.013
r_gen_planes_refined0.006
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms8050
Nucleic Acid Atoms
Solvent Atoms424
Heterogen Atoms56

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALEPACKdata scaling
AMoREphasing