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p38alpha MAP kinase bound to MPAQ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 298 6-10% PEG-MME 5000, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.34 47.34
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 66.332 α = 90 b = 75.84 β = 90 c = 78.112 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2002-07-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX9.6 0.87 SRS PX9.6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 50.57 87.5 20606 20606
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.32 71.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.2 30 17778 16852 926 86.34 0.21961 0.21961 0.21797 0.2364 0.2497 0.2634 RANDOM 25.953
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -2.03 -1.41 3.44
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.455 r_scangle_it 2.523 r_scbond_it 1.566 r_angle_refined_deg 1.447 r_mcangle_it 1.083 r_angle_other_deg 0.871 r_mcbond_it 0.598 r_symmetry_hbond_refined 0.288 r_symmetry_vdw_other 0.263 r_nbd_other 0.23
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.455 r_scangle_it 2.523 r_scbond_it 1.566 r_angle_refined_deg 1.447 r_mcangle_it 1.083 r_angle_other_deg 0.871 r_mcbond_it 0.598 r_symmetry_hbond_refined 0.288 r_symmetry_vdw_other 0.263 r_nbd_other 0.23 r_nbd_refined 0.206 r_xyhbond_nbd_refined 0.195 r_symmetry_vdw_refined 0.147 r_nbtor_other 0.088 r_chiral_restr 0.074 r_bond_refined_d 0.014 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2695 Nucleic Acid Atoms Solvent Atoms 81 Heterogen Atoms 43
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling AMoRE phasing