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Crystal Structure of CLA-producing fatty acid isomerase from P. acnes
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8.5 283 2% PEG 400, 0.02M Bis-Tris, 2M lithium sulphate, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 283K
Crystal Properties Matthews coefficient Solvent content 3.49 64.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 160.279 α = 90 b = 160.279 β = 90 c = 160.279 γ = 90
Symmetry Space Group I 21 3
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 2005-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.21 50 87.9 58536 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.21 2.29 19.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIRAS THROUGHOUT 2.22 22.67 29833 1550 92.6 0.17876 0.17683 0.1895 0.21528 0.2211 RANDOM 39.282
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.963 r_dihedral_angle_4_deg 18.531 r_dihedral_angle_3_deg 13.19 r_dihedral_angle_1_deg 6.299 r_scangle_it 2.456 r_scbond_it 1.551 r_angle_refined_deg 1.203 r_mcangle_it 0.868 r_angle_other_deg 0.861 r_mcbond_it 0.451
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.963 r_dihedral_angle_4_deg 18.531 r_dihedral_angle_3_deg 13.19 r_dihedral_angle_1_deg 6.299 r_scangle_it 2.456 r_scbond_it 1.551 r_angle_refined_deg 1.203 r_mcangle_it 0.868 r_angle_other_deg 0.861 r_mcbond_it 0.451 r_symmetry_hbond_refined 0.279 r_symmetry_vdw_other 0.218 r_nbd_refined 0.205 r_nbd_other 0.204 r_nbtor_refined 0.183 r_xyhbond_nbd_refined 0.163 r_symmetry_vdw_refined 0.127 r_mcbond_other 0.087 r_nbtor_other 0.084 r_metal_ion_refined 0.079 r_chiral_restr 0.069 r_bond_refined_d 0.01 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3447 Nucleic Acid Atoms Solvent Atoms 354 Heterogen Atoms 107
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling SHELXD phasing SHELXE model building