2AIH

1H-NMR solution structure of a trypsin/chymotrypsin Bowman-Birk inhibitor from Lens culinaris.


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D TOCSY1 mM LCTI, unbuffered solution, 90% H2O, 10% D2O90% H2O/10% D2O3 mM3.0ambient288
22D TOCSY1 mM LCTI, unbuffered solution, 90% H2O, 10% D2O90% H2O/10% D2O3 mM3.0ambient293
32D TOCSY1 mM LCTI, unbuffered solution, 90% H2O, 10% D2O90% H2O/10% D2O3 mM3.0ambient298
42D TOCSY1 mM LCTI, unbuffered solution, 90% H2O, 10% D2O90% H2O/10% D2O3 mM3.0ambient303
52D TOCSY1 mM LCTI, unbuffered solution, 90% H2O, 10% D2O90% H2O/10% D2O5 mM4.2ambient298
62D TOCSY1 mM LCTI, unbuffered solution100% D2O3 mM3.0ambient298
72D NOESY1 mM LCTI, unbuffered solution, 90% H2O, 10% D2O90% H2O/10% D2O3 mM3.0ambient298
8DQF-COSY1 mM LCTI, unbuffered solution, 90% H2O, 10% D2O90% H2O/10% D2O3 mM3.0ambient298
9DQF-COSY1 mM LCTI, unbuffered solution100% D2O3 mM3.0ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAMX600
NMR Refinement
MethodDetailsSoftware
simulated annealing molecular dynamics matrix relaxation energy minimizationthe structures are based on a total of 2745 restraints, of which 632 are NOE-derived distance constraints for the initial stage of Simulated Annealing, 2068 are NOESY-derived cross-peak volumes for final refinement, 29 vicinal coupling constants restraints, 16 distance restraints for hydrogen bond definitions; The chloride atoms at the end of each model were added during the refinement stage of restrained energy minimization to reduce overall charge. Positions are not experimentally determined but are a result of calculationsXwinNMR
NMR Ensemble Information
Conformer Selection Criteriaback calculated data agree with experimental NOESY spectrum
Conformers Calculated Total Number52
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Additional NMR Experimental Information
DetailsNOESY experiments were performed at 298 K at three different mixing times (0.080s, 0.120s, 0.350s) for distance restraints calculations and cross-peak volume measurements
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR2.6
2processingXwinNMR2.6
3data analysisSparky3.106Goddard, T.D. and Kneller, D.G.
4refinementX-PLOR3.1851Brunger, A.T.
5iterative matrix relaxationX-PLOR3.1851Brunger, A.T.