X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP2.2293PEG400, ammonium sulfate, pH 2.2, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.140.8

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 57.998α = 90
b = 72.736β = 90
c = 82.625γ = 90
Symmetry
Space GroupP 21 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCHMirrors2001-04-05MMAD
21x-ray100CCDMARRESEARCHMirrors2001-04-05MMAD
1,21
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONMPG/DESY, HAMBURG BEAMLINE BW60.9796, 0.9808, 0.95MPG/DESY, HAMBURGBW6
2SYNCHROTRONMPG/DESY, HAMBURG BEAMLINE BW60.9167, 0.9183, 0.90MPG/DESY, HAMBURGBW6

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1,21.951890.52684024290
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1,222.186.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ID 2AEU2182300620860112890.70.224640.224640.22210.2707RANDOM38.776
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.060.95-0.9
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.294
r_dihedral_angle_3_deg16.52
r_dihedral_angle_4_deg12.855
r_dihedral_angle_1_deg5.686
r_scangle_it3.537
r_mcangle_it3.141
r_scbond_it2.567
r_mcbond_it2.292
r_angle_refined_deg1.174
r_nbtor_refined0.3
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.294
r_dihedral_angle_3_deg16.52
r_dihedral_angle_4_deg12.855
r_dihedral_angle_1_deg5.686
r_scangle_it3.537
r_mcangle_it3.141
r_scbond_it2.567
r_mcbond_it2.292
r_angle_refined_deg1.174
r_nbtor_refined0.3
r_nbd_refined0.193
r_symmetry_vdw_refined0.193
r_xyhbond_nbd_refined0.132
r_symmetry_hbond_refined0.119
r_chiral_restr0.076
r_bond_refined_d0.008
r_gen_planes_refined0.004
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2894
Nucleic Acid Atoms
Solvent Atoms180
Heterogen Atoms45

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
MOLREPphasing