2AAN

Auracyanin A: A "blue" copper protein from the green thermophilic photosynthetic bacterium,chloroflexus aurantiacus


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP5.2277Lithium sulfate, sodium citrate, pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
238.7

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 70.578α = 90
b = 70.578β = 90
c = 45.665γ = 90
Symmetry
Space GroupP 41 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2004-03-07MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONMAX II BEAMLINE I911-50.96868MAX III911-5

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.853095.60.08610.8966796672215.5
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.851.89899.30.3210

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTauracyanin B1.85189667920246593.850.164360.164360.162170.20703RANDOM16.993
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.490.49-0.98
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.716
r_dihedral_angle_3_deg10.959
r_dihedral_angle_4_deg8.031
r_scangle_it7.487
r_dihedral_angle_1_deg7.017
r_scbond_it5.124
r_mcangle_it4.502
r_mcbond_it4.393
r_angle_refined_deg1.586
r_mcbond_other1.38
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.716
r_dihedral_angle_3_deg10.959
r_dihedral_angle_4_deg8.031
r_scangle_it7.487
r_dihedral_angle_1_deg7.017
r_scbond_it5.124
r_mcangle_it4.502
r_mcbond_it4.393
r_angle_refined_deg1.586
r_mcbond_other1.38
r_angle_other_deg0.792
r_symmetry_hbond_refined0.2
r_nbd_refined0.197
r_nbtor_refined0.179
r_nbd_other0.168
r_symmetry_vdw_refined0.154
r_xyhbond_nbd_refined0.14
r_symmetry_vdw_other0.104
r_chiral_restr0.1
r_nbtor_other0.086
r_bond_refined_d0.015
r_gen_planes_refined0.006
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms901
Nucleic Acid Atoms
Solvent Atoms92
Heterogen Atoms11

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
AMoREphasing