2A50

fluorescent protein asFP595, wt, off-state


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7.1293PEG 3350, NaCl, pH 7.1, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.140.4

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 76.174α = 90
b = 126.5β = 90
c = 94.108γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2004-07-19MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONMPG/DESY, HAMBURG BEAMLINE BW61.05MPG/DESY, HAMBURGBW6

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.33099.7111382111048
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.31.3299.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.320105752105329555199.560.154420.154420.153030.17946RANDOM20.373
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.52-1.320.8
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.891
r_dihedral_angle_4_deg17.771
r_dihedral_angle_3_deg12.377
r_sphericity_free7.94
r_dihedral_angle_1_deg6.879
r_sphericity_bonded6.521
r_scangle_it3.702
r_mcangle_it3.247
r_scbond_it2.806
r_mcbond_it2.501
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.891
r_dihedral_angle_4_deg17.771
r_dihedral_angle_3_deg12.377
r_sphericity_free7.94
r_dihedral_angle_1_deg6.879
r_sphericity_bonded6.521
r_scangle_it3.702
r_mcangle_it3.247
r_scbond_it2.806
r_mcbond_it2.501
r_rigid_bond_restr2.102
r_angle_refined_deg1.596
r_nbtor_refined0.305
r_nbd_refined0.213
r_symmetry_vdw_refined0.174
r_symmetry_hbond_refined0.17
r_xyhbond_nbd_refined0.129
r_chiral_restr0.102
r_bond_refined_d0.012
r_gen_planes_refined0.007
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3635
Nucleic Acid Atoms
Solvent Atoms659
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
MOLREPphasing