2A3J | pdb_00002a3j

Structure of URNdesign, a complete computational redesign of human U1A protein

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D NOESY	U-15N,variant of U1A, 50 mM Sodium Phosphate,5% D2O	5% D2O in water	50 mM sodium phosphate	6.8	ambient	298
2	15N-HSQC	U-15N,variant of U1A, 50 mM Sodium Phosphate,5% D2O	5% D2O in water	50 mM sodium phosphate	6.8	ambient	298
3	13C-15N-HSQC	U-15N, 13C, variant of U1A, 50 mM Sodium Phosphate, 5% D2O	5% D2O in water	50 mM sodium phosphate	6.8	ambient	298
4	HNCA(CO)CB	U-15N, 13C, variant of U1A, 50 mM Sodium Phosphate, 5% D2O	5% D2O in water	50 mM sodium phosphate	6.8	ambient	298
5	HNCA	U-15N, 13C, variant of U1A, 50 mM Sodium Phosphate, 5% D2O	5% D2O in water	50 mM sodium phosphate	6.8	ambient	298
6	HNCO	U-15N, 13C, variant of U1A, 50 mM Sodium Phosphate, 5% D2O	5% D2O in water	50 mM sodium phosphate	6.8	ambient	298
7	HBHA(CO)NH	U-15N, 13C, variant of U1A, 50 mM Sodium Phosphate, 5% D2O	5% D2O in water	50 mM sodium phosphate	6.8	ambient	298
8	CBCA(CO)NH	U-15N, 13C, variant of U1A, 50 mM Sodium Phosphate, 5% D2O	5% D2O in water	50 mM sodium phosphate	6.8	ambient	298
9	3D HCCH-TOCSY	U-15N, 13C, variant of U1A, 50 mM Sodium Phosphate, 5% D2O	5% D2O in water	50 mM sodium phosphate	6.8	ambient	298
10	3D 13C-edited NOESY	U-15N, 13C, variant of U1A, 50 mM Sodium Phosphate, 5% D2O	5% D2O in water	50 mM sodium phosphate	6.8	ambient	298
11	3D 15N-EDITED NOESY	U-15N,variant of U1A, 50 mM Sodium Phosphate,5% D2O	5% D2O in water	50 mM sodium phosphate	6.8	ambient	298
12	2D NOESY IN D2O	U-15N,variant of U1A, 50 mM Sodium Phosphate,5% D2O	5% D2O in water	50 mM sodium phosphate	6.8	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	500
2	Bruker	AVANCE	750
3	Varian	AMX	600

NMR Refinement
Method	Details	Software
simulated annealing		NMRPipe

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	data analysis	NMRPipe	1.0	DELAGLIO
2	refinement	CYANA	1.1, 2.0	GUNTERT
3	structure solution	CANDID	1.1, 2.0
4	structure solution	CYANA	1.1, 2.0

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.