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Solution structures of BRD9 bromodomain in complex with histone H3 acetyl-lysine 18 (H3K18ac) peptide
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-15N NOESY 500 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 2 mM DTT 90% H2O/10% D2O Null 7.4 1 atm 298 Bruker AVANCE 800 2 3D 1H-13C NOESY aliphatic 500 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 2 mM DTT 100% D2O Null 7.4 1 atm 298 Bruker AVANCE 800 3 3D 1H-13C NOESY aromatic 500 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 2 mM DTT 100% D2O Null 7.4 1 atm 298 Bruker AVANCE 800 4 3D filtered-1H-13C NOESY aliphatic 500 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 2 mM DTT 100% D2O Null 7.4 1 atm 298 Bruker AVANCE 800 5 3D filtered-1H-13C NOESY aromatic 500 mM sodium chloride, 2.7 mM potassium chloride, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 2 mM DTT 100% D2O Null 7.4 1 atm 298 Bruker AVANCE 800
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800
NMR Refinement Method Details Software torsion angle dynamics ARIA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement ARIA Linge, O'Donoghue and Nilges 2 structure calculation CNS Brunger, Adams, Clore, Gros, Nilges and Read 3 chemical shift assignment NMRView Johnson, One Moon Scientific 4 peak picking NMRView Johnson, One Moon Scientific 5 collection TopSpin Bruker Biospin 6 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax