1YQF

Hypothetical protein from leishmania major unknown function sequence homologue to human p32 protein

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP	7.5	290	0.4 ul protein 19 mg/ml 0.4 ul crystallization buffer 20% PEG 4000, 100 mM CaCl2, 100 mM HEPES pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 290K

Crystal Properties
Matthews coefficient	Solvent content
2.35	47.55

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 64.738	α = 90
b = 113.91	β = 90.489
c = 87.858	γ = 90

Symmetry
Space Group	P 1 21 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray		CCD	ADSC QUANTUM 210		2004-11-07	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	ALS BEAMLINE 5.0.1		ALS	5.0.1

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.3	19.035				56510	56021

Refinement

Statistics
Diffraction ID	Structure Solution Method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	2.3	19.035	53207	2824		0.2549	0.2735	37.702

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
0.73		0.191	1.035		-1.762

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_1_deg	4.097
r_scangle_it	1.321
r_mcangle_it	1.134
r_symmetry_vdw_refined	0.921
r_angle_other_deg	0.914
r_angle_refined_deg	0.895
r_scbond_it	0.711
r_scangle_it_other	0.639
r_mcbond_it	0.611
r_mcangle_other	0.599
r_symmetry_hbond_refined	0.575
r_symmetry_vdw_other	0.459
r_scbond_other	0.195
r_nbd_other	0.191
r_nbtor_refined	0.166
r_nbd_refined	0.143
r_xyhbond_nbd_refined	0.094
r_nbtor_other	0.077
r_chiral_restr	0.067
r_mcbond_other	0.045
r_bond_refined_d	0.011
r_bond_other_d	0.011
r_gen_planes_other	0.005
r_gen_planes_refined	0.003

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	8643
Nucleic Acid Atoms
Solvent Atoms	196
Heterogen Atoms

Software

Software
Software Name	Purpose
EPMR	phasing
PDB_EXTRACT	data extraction
DM	phasing
REFMAC	refinement
Blu-Ice	data collection
ELVES	data scaling