1XA0

Crystal Structure of MCSG Target APC35536 from Bacillus stearothermophilus


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION8.3298160mM Ammonium sulfate, pH 8.3, VAPOR DIFFUSION, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.957.2

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 156.236α = 90
b = 156.236β = 90
c = 68.569γ = 90
Symmetry
Space GroupP 41 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray99.8CCDMARRESEARCHMirror2004-03-18MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 32-ID0.9790APS32-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.653099.90.0852838928389-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.652.7598.60.5755.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2.8302143919268217199.960.218360.212350.26931RANDOM36.503
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
3.853.85-7.69
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg3.013
r_mcangle_it2.247
r_scangle_it2.209
r_scbond_it1.428
r_angle_refined_deg1.42
r_mcbond_it1.298
r_symmetry_hbond_refined0.281
r_chiral_restr0.267
r_nbd_refined0.204
r_symmetry_vdw_refined0.189
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg3.013
r_mcangle_it2.247
r_scangle_it2.209
r_scbond_it1.428
r_angle_refined_deg1.42
r_mcbond_it1.298
r_symmetry_hbond_refined0.281
r_chiral_restr0.267
r_nbd_refined0.204
r_symmetry_vdw_refined0.189
r_xyhbond_nbd_refined0.18
r_bond_refined_d0.013
r_gen_planes_refined0.004
r_bond_other_d
r_angle_other_deg
r_dihedral_angle_2_deg
r_dihedral_angle_3_deg
r_dihedral_angle_4_deg
r_gen_planes_other
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4803
Nucleic Acid Atoms
Solvent Atoms48
Heterogen Atoms16

Software

Software
Software NamePurpose
REFMACrefinement
SCALEPACKdata scaling
CNSrefinement
MAR345data collection
CNSphasing