1WJ0
Solution Structure of the DNA-Binding Domain of Squamosa Promoter Binding Protein-Like 12 Lacking the Second Zinc-Binding Site
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 1mM SPL12-DBD fragment; 20mM KPi; 300mM KCl; 0.02mM ZNCL2; 1mM DTT; 95% H2O; 5% D2O | 0.3M | 6.0 | 1 atm | 293 | ||
2 | 2D TOCSY | 1mM SPL12-DBD fragment; 20mM KPi; 300mM KCl; 0.02mM ZNCL2; 1mM DTT; 95% H2O; 5% D2O | 0.3M | 6.0 | 1 atm | 293 | ||
3 | DQF-COSY | 1mM SPL12-DBD fragment; 20mM KPi; 300mM KCl; 0.02mM ZNCL2; 1mM DTT; 95% H2O; 5% D2O | 0.3M | 6.0 | 1 atm | 293 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 750 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | Felix |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 20 |
Representative Model | 9 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | data analysis | Felix | 2000 | MSI |
2 | structure solution | CNS | 1.1 | |
3 | refinement | CNS | 1.1 |