1UTI

Mona/Gads SH3C in complex with HPK derived peptide


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.52M AMMONIUM SULFATE, 0.05M HEPES PH7.5, pH 7.50
Crystal Properties
Matthews coefficientSolvent content
1.832.7

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 71.456α = 90
b = 27.442β = 104.22
c = 33.043γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCHMIRRORS2003-08-15MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE BM14ESRFBM14

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.52097.40.0325.23.49855
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.51.5598.20.06514.73

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1OEB1.534.71957348599.30.2080.2070.221RANDOM14.04
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.31-0.210.250.95
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.625
r_scangle_it2.604
r_scbond_it1.59
r_mcangle_it1.312
r_angle_refined_deg1.113
r_angle_other_deg0.785
r_mcbond_it0.699
r_nbd_other0.233
r_symmetry_vdw_other0.222
r_nbd_refined0.19
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.625
r_scangle_it2.604
r_scbond_it1.59
r_mcangle_it1.312
r_angle_refined_deg1.113
r_angle_other_deg0.785
r_mcbond_it0.699
r_nbd_other0.233
r_symmetry_vdw_other0.222
r_nbd_refined0.19
r_symmetry_hbond_refined0.138
r_xyhbond_nbd_refined0.135
r_nbtor_other0.081
r_chiral_restr0.074
r_bond_refined_d0.012
r_gen_planes_refined0.004
r_symmetry_vdw_refined0.004
r_bond_other_d0.002
r_gen_planes_other0.002
r_dihedral_angle_2_deg
r_dihedral_angle_3_deg
r_dihedral_angle_4_deg
r_nbtor_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms590
Nucleic Acid Atoms
Solvent Atoms63
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
AMoREphasing