1UTI | pdb_00001uti

Mona/Gads SH3C in complex with HPK derived peptide

X-RAY DIFFRACTION

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Starting Model(s)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	1OEB	PDB ENTRY 1OEB

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1		7.5		2M AMMONIUM SULFATE, 0.05M HEPES PH7.5, pH 7.50

Crystal Properties
Matthews coefficient	Solvent content
1.8	32.7

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 71.456	α = 90
b = 27.442	β = 104.22
c = 33.043	γ = 90

Symmetry
Space Group	C 1 2 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	MARRESEARCH	MIRRORS	2003-08-15	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	ESRF BEAMLINE BM14		ESRF	BM14

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.5	20	97.4	0.03	25.2	3.4		9855

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.5	1.55	98.2		0.065	14.7	3

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	PDB ENTRY 1OEB	1.5	34.71	9573	485	99.3	0.208	0.207	0.22	0.221	0.23	RANDOM	14.04

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-1.31		-0.21	0.25		0.95

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_1_deg	5.625
r_scangle_it	2.604
r_scbond_it	1.59
r_mcangle_it	1.312
r_angle_refined_deg	1.113
r_angle_other_deg	0.785
r_mcbond_it	0.699
r_nbd_other	0.233
r_symmetry_vdw_other	0.222
r_nbd_refined	0.19
r_symmetry_hbond_refined	0.138
r_xyhbond_nbd_refined	0.135
r_nbtor_other	0.081
r_chiral_restr	0.074
r_bond_refined_d	0.012
r_gen_planes_refined	0.004
r_symmetry_vdw_refined	0.004
r_bond_other_d	0.002
r_gen_planes_other	0.002
r_dihedral_angle_2_deg
r_dihedral_angle_3_deg
r_dihedral_angle_4_deg
r_nbtor_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	590
Nucleic Acid Atoms
Solvent Atoms	63
Heterogen Atoms

Software

Software
Software Name	Purpose
REFMAC	refinement
DENZO	data reduction
SCALEPACK	data scaling
AMoRE	phasing