1UDK
Solution Structure of Nawaprin
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D NOESY | 1.7mM Nawaprin | 90% H2O/10% D2O | no salt added | 3.1 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing, molecular dynamics, distance geometry, torsion angle dynamics | The structures are based on a total of 530 restraints, 503 are NOE-derived distance restraints, 9 dihedral angle restraints, 18 distance restraints from hydrogen bonds. | XwinNMR |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 3000 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (closest to the average) |
| Additional NMR Experimental Information | |
|---|---|
| Details | The structures were determined using standard 2D homonuclear techniques. |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | XwinNMR | 3.1 | Bruker |
| 2 | processing | XwinNMR | 3.1 | Buker |
| 3 | data analysis | XEASY | 1.3.13 | Bartels, C., Xia, T., Billeter, M., Guntert, P., Wuthrich, K. |
| 4 | data analysis | INFIT | Szyperski, I., Guntert, P., Otting, G., Wuthrich, K. | |
| 5 | structure solution | DYANA | 1.5 | Guntert, P., Mumenthaler, C., Wuthrich, K. |
| 6 | refinement | CNS | 1.1 | |
