1TOZ

NMR structure of the human NOTCH-1 ligand binding region


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY0.5-1mM protein90% H2O, 10% D2O, 15mM CaCl2, 0.02% NaN315mM CaCl26.1ambient298
23D_15N-separated_NOESY0.5-1mM protein90% H2O, 10% D2O, 15mM CaCl2, 0.02% NaN315mM CaCl26.1ambient298
3HMQC-J0.5-1mM protein90% H2O, 10% D2O, 15mM CaCl2, 0.02% NaN315mM CaCl26.1ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1GEOMEGA600
2GEOMEGA750
3BrukerDRX800
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsInput manually assigned 15N-edited NOESY peaks, unassigned 13C-edited NOESY peaks. See publication for further details.CYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number600
Conformers Submitted Total Number20
Representative Model9 (fewest violations)
Additional NMR Experimental Information
DetailsAdditional torsion angle restraints derived using TALOS. Calcium atoms incorporated during structure calculations, and restraints incorporated based on the crystal structure 1EDM as described.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCYANA1.0.6Guntert, P.
2refinementCYANA1.0.6Guntert, P.