1T8V
The NMR structure of d34a i-fabp: implications for the determinants of ligand binding stoichiometry
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 20 mM potassium phosphate, 50 mM KCl, 0.5% NaN3, 95% H2O, 5% D2O | 95% H2O/5% D2O | 50mM KCl | 7.2 | 298 | ||
2 | 3D_15N-separated_NOESY | 20 mM potassium phosphate, 50 mM KCl, 0.5% NaN3, 95% H2O, 5% D2O | 95% H2O/5% D2O | 50mM KCl | 7.2 | 298 | ||
3 | 3D_13C_AROMATIC_NOESY | 20 mM potassium phosphate, 50 mM KCl, 0.5% NaN3, 95% H2O, 5% D2O | 95% H2O/5% D2O | 50mM KCl | 7.2 | 298 | ||
4 | 3D_15N-15N_NOESY | 20 mM potassium phosphate, 50 mM KCl, 0.5% NaN3, 95% H2O, 5% D2O | 95% H2O/5% D2O | 50mM KCl | 7.2 | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 500 |
2 | Varian | INOVA | 600 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry, simulated annealing, molecular dynamics, torsion angle dynamics | the structures are based on a total of 3471 NOE-derived restraints and 80 dihedral angle restraints. | VNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 20 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
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Details | The structure was determined using triple-resonance NMR spectroscopy. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | VNMR | 6.1 | Varian Associates |
2 | processing | Felix | 2001 | Accelrys Inc. |
3 | structure solution | CNS | 1.1 | Brnger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, T. J., Rice, L. M., Simonson, T., and Warren, G. L |
4 | structure solution | ARIA | 1.2 | Linge, O'Donoghue, Nilges |
5 | refinement | ARIA | 1.2 | Linge, O'Donoghue, Nilges |