1SS3 | pdb_00001ss3

Solution structure of Ole e 6, an allergen from olive tree pollen

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D NOESY	0.6 mM ole e 6; 95% H2O, 5% D2O	95% H2O/5% D2O	null	6.0	ambient	308
2	2D TOCSY	0.6 mM ole e 6; 95% H2O, 5% D2O	95% H2O/5% D2O	null	6.0	ambient	308
3	DQF-COSY	0.6 mM ole e 6; 95% H2O, 5% D2O	95% H2O/5% D2O	null	6.0	ambient	308
4	2D NOESY	0.6 mM ole e 6; 100% D2O	100% D2O	null	6.0	ambient	308
5	2D TOCSY	0.6 mM ole e 6; 100% D2O	100% D2O	null	6.0	ambient	308
6	3D_15N-separated_NOESY	1mM ole e 6 U-15N; 95% H2O, 5% D2O	95% H2O/5% D2O	null	6.0	ambient	308

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	600

NMR Refinement
Method	Details	Software
simulated annealing, torsion angle dynamics	the structures are based on a total of 1428 unambigous NOEs, which leads to 900 upper limit distances. 486 relevant distance restraints, and 24 angle constraints were used. The best conformers were energy-minimized with AMBER7	XwinNMR

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	25
Representative Model	1 (lowest energy)

Additional NMR Experimental Information
Details	These structures were determined using standard 2D-NOE homonuclear techniques and 3D-NOE heteronuclear techniques

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	XwinNMR	3.1
2	processing	XwinNMR	3.1
3	data analysis	ANSIG	3.3
4	structure solution	DYANA	1.5
5	refinement	DYANA	1.5
6	refinement	Amber	7