1SS3

Solution structure of Ole e 6, an allergen from olive tree pollen


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY0.6 mM ole e 6; 95% H2O, 5% D2O95% H2O/5% D2Onull6.0ambient308
22D TOCSY0.6 mM ole e 6; 95% H2O, 5% D2O95% H2O/5% D2Onull6.0ambient308
3DQF-COSY0.6 mM ole e 6; 95% H2O, 5% D2O95% H2O/5% D2Onull6.0ambient308
42D NOESY0.6 mM ole e 6; 100% D2O100% D2Onull6.0ambient308
52D TOCSY0.6 mM ole e 6; 100% D2O100% D2Onull6.0ambient308
63D_15N-separated_NOESY1mM ole e 6 U-15N; 95% H2O, 5% D2O95% H2O/5% D2Onull6.0ambient308
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
simulated annealing, torsion angle dynamicsthe structures are based on a total of 1428 unambigous NOEs, which leads to 900 upper limit distances. 486 relevant distance restraints, and 24 angle constraints were used. The best conformers were energy-minimized with AMBER7XwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number25
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsThese structures were determined using standard 2D-NOE homonuclear techniques and 3D-NOE heteronuclear techniques
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR3.1
2processingXwinNMR3.1
3data analysisANSIG3.3
4structure solutionDYANA1.5
5refinementDYANA1.5
6refinementAmber7