X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
16293PEG 4000, imidazol-malate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K, pH 6.00
Crystal Properties
Matthews coefficientSolvent content
2.5351

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 70.414α = 90
b = 54.077β = 96.12
c = 109.751γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2003-01-24MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE BW7A0.9881,0.9809,0.815EMBL/DESY, HamburgBW7A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.952091.60.0539.54.355200
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.952670.3112.31.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT1.95125497553883109291.660.177750.176880.21932RANDOM26.675
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.040.141.77-1.7
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.765
r_scangle_it2.817
r_scbond_it1.679
r_mcangle_it1.494
r_angle_refined_deg1.188
r_mcbond_it0.793
r_angle_other_deg0.769
r_symmetry_hbond_refined0.465
r_symmetry_vdw_other0.247
r_nbd_other0.232
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.765
r_scangle_it2.817
r_scbond_it1.679
r_mcangle_it1.494
r_angle_refined_deg1.188
r_mcbond_it0.793
r_angle_other_deg0.769
r_symmetry_hbond_refined0.465
r_symmetry_vdw_other0.247
r_nbd_other0.232
r_nbd_refined0.194
r_symmetry_vdw_refined0.155
r_xyhbond_nbd_refined0.151
r_nbtor_other0.08
r_chiral_restr0.073
r_bond_refined_d0.009
r_gen_planes_refined0.004
r_gen_planes_other0.003
r_bond_other_d0.002
r_dihedral_angle_2_deg
r_dihedral_angle_3_deg
r_dihedral_angle_4_deg
r_nbtor_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5513
Nucleic Acid Atoms
Solvent Atoms331
Heterogen Atoms18

Software

Software
Software NamePurpose
DENZOdata reduction
SCALAdata scaling
SOLVEphasing
REFMACrefinement
CCP4data scaling