1Q40
Crystal structure of the C. albicans Mtr2-Mex67 M domain complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | d1q40c_ | Alpha and beta proteins (a+b) | Cystatin-like | NTF2-like | NTF2-like | mRNA transport regulator MTR2 | (Candida albicans ) [TaxId: 5476 ], | SCOPe (2.08) |
A | d1q40a_ | Alpha and beta proteins (a+b) | Cystatin-like | NTF2-like | NTF2-like | mRNA transport regulator MTR2 | (Candida albicans ) [TaxId: 5476 ], | SCOPe (2.08) |
B | d1q40b_ | Alpha and beta proteins (a+b) | Cystatin-like | NTF2-like | NTF2-like | NTF2-like domain of mRNA export factor MEX67 | (Candida albicans ) [TaxId: 5476 ], | SCOPe (2.08) |
D | d1q40d_ | Alpha and beta proteins (a+b) | Cystatin-like | NTF2-like | NTF2-like | NTF2-like domain of mRNA export factor MEX67 | (Candida albicans ) [TaxId: 5476 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | NTF2-like | 8039668 | 3000472 | SCOP2B (2022-06-29) |
A | SCOP2 Family | NTF2-like | 8027289 | 4001021 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | NTF2-like | 8039668 | 3000472 | SCOP2 (2022-06-29) |
B | SCOP2 Family | NTF2-like | 8027290 | 4001021 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | NTF2-like | 8039669 | 3000472 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | NTF2-like | 8039669 | 3000472 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | Mtr2 | e1q40C1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: Mtr2 | ECOD (1.6) |
A | Mtr2 | e1q40A1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: Mtr2 | ECOD (1.6) |
B | NTF2_1 | e1q40B1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: NTF2_1 | ECOD (1.6) |
D | NTF2_1 | e1q40D1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: NTF2_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 3.10.450.50 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
A | 3.10.450.50 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
B | 3.10.450.50 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
D | 3.10.450.50 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF10429 | Nuclear pore RNA shuttling protein Mtr2 (Mtr2) | Nuclear pore RNA shuttling protein Mtr2 | Mtr2 is a monomeric, dual-action, RNA-shuttle protein found in yeasts. Transport across the nuclear-cytoplasmic membrane is via the macro-molecular membrane-spanning nuclear pore complex, NPC. The pore is lined by a subset of NPC members called nucle ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR032710 | NTF2-like domain superfamily | Homologous Superfamily | |
IPR019488 | Nuclear pore RNA shuttling protein Mtr2 | Family | |
IPR030217 | Nuclear RNA export factor | Family | |
IPR032710 | NTF2-like domain superfamily | Homologous Superfamily | |
IPR001611 | Leucine-rich repeat | Repeat | |
IPR018222 | Nuclear transport factor 2, eukaryote | Domain | |
IPR032675 | Leucine-rich repeat domain superfamily | Homologous Superfamily | |
IPR040736 | Mex67, RNA recognition motif | Domain | |
IPR009060 | UBA-like superfamily | Homologous Superfamily | |
IPR005637 | TAP C-terminal (TAP-C) domain | Domain |