1PV3

NMR Solution Structure of the Avian FAT-domain of Focal Adhesion Kinase


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY0.85 mM Focal Adhesion Targeting Domain U-15N,13C, 25 mM Tris-Maleate, 0.1 % NaN3, 1.0 uM PPACK, 0.5 mg/mL Pefabloc 90% H2O, 10% D2O90% H2O/10% D2O150 mM NaCl6.0ambient310
23D_15N-separated_NOESY0.85 mM Focal Adhesion Targeting Domain U-15N,13C, 25 mM Tris-Maleate, 0.1 % NaN3, 1.0 uM PPACK, 0.5 mg/mL Pefabloc 90% H2O, 10% D2O90% H2O/10% D2O150 mM NaCl6.0ambient310
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2VarianINOVA800
NMR Refinement
MethodDetailsSoftware
distance geometry simulated annealing3049 total restraints: 1627 unambiguous NOE-derived distance constraints, 1078 ambiguous NOE-derived distance constraints, 83 dihedral angle restraints, 97 distance restraints from hydrogen bonds, 164 residual dipolar coupling restraintsNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with acceptable covalent geometry,structures with the lowest energy
Conformers Calculated Total Number25
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsPDB entry 1K40 was used as a starting template for structure calculations. The structure was determined using triple-resonance NMR spectroscopy.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe1.0Delaglio, F., Grzesiek, S., Vuister., G., Zhu, G., Pfeifer, J., Bax, A.
2data analysisNMRView5.0.4Johnson, B., Blevins, R.A.
3structure solutionCNS1.1Brunger, A.T.,Adams, P.D., Clore, G.M., DeLano, W.L., Gros, P., Grosse-Kunstleve. R.W., Jiang, J.S., Kuszewski, J., Nilges, M.,Pannu, N.S., Read, R.J., Rice, L.M., Simonson, T., Warren, G.L.
4structure solutionARIA1.2Nilges, M.
5refinementARIA1.2Nilges, M.