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The crystal structure of a pheromone binding protein from the cockroach Leucophaea maderae in complex with a component of the pheromonal blend: 3-hydroxy-butan-2-one.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 5.6 293 NaCitrate, Na/K Tartrate, Ammonium Sulfate, pH 5.6, VAPOR DIFFUSION, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.89 34.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 38.217 α = 90 b = 62.21 β = 92.47 c = 45.117 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH mirrors 2002-10-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM14 0.919214 ESRF BM14
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 29.748 97 0.046 10.1 3.5 23078 23078
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.79 93.1 0.182 3.7 3.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.7 20 23380 20755 1904 96.92 0.14508 0.14508 0.14135 0.1551 0.18447 0.195 RANDOM 15.895
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.03 0.18 0.74 -0.69
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.282 r_scangle_it 3.875 r_scbond_it 2.363 r_angle_other_deg 1.671 r_mcangle_it 1.56 r_angle_refined_deg 1.493 r_mcbond_it 0.871 r_symmetry_vdw_other 0.32 r_xyhbond_nbd_refined 0.281 r_nbd_other 0.245
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.282 r_scangle_it 3.875 r_scbond_it 2.363 r_angle_other_deg 1.671 r_mcangle_it 1.56 r_angle_refined_deg 1.493 r_mcbond_it 0.871 r_symmetry_vdw_other 0.32 r_xyhbond_nbd_refined 0.281 r_nbd_other 0.245 r_symmetry_hbond_refined 0.234 r_nbd_refined 0.219 r_symmetry_vdw_refined 0.092 r_nbtor_other 0.088 r_chiral_restr 0.085 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_dihedral_angle_2_deg r_xyhbond_nbd_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1799 Nucleic Acid Atoms Solvent Atoms 236 Heterogen Atoms 24
Software Software Software Name Purpose REFMAC refinement DENZO data reduction CCP4 data scaling AMoRE phasing