1N37

NMR Solution Structure of the Anthracycline Respinomycin D Intercalation Complex with a Double Stranded DNA Molecule (AGACGTCT)2

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D NOESY	Respinomycin D, D(AGACGTCT)2, TSP, NaN3, Na-ETDA	D2O	100mM NaCl 10mM Na2HPO4	7	1 atm	298
2	2D TOCSY	Respinomycin D, D(AGACGTCT)2, TSP, NaN3, Na-ETDA	D2O	100mM NaCl 10mM Na2HPO4	7	1 atm	298
3	DQF-COSY	Respinomycin D, D(AGACGTCT)2, TSP, NaN3, Na-ETDA	D2O	100mM NaCl 10mM Na2HPO4	7	1 atm	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	500

NMR Refinement
Method	Details	Software
molecular dynamics	Sample was subjected to 500ps of restrained molecular dynamics. Using the AMBER94 Force Field	SANDER(AMBER)

NMR Ensemble Information
Conformer Selection Criteria
Conformers Calculated Total Number
Conformers Submitted Total Number	1
Representative Model	1 (n/a)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	structure solution	SANDER(AMBER)	4.1	PEARLMAN,CASE,CALDWELL,ROSS,CHEATHAM,FERGUSON,SEIBEL,SINGH,WEINER,KOLLMAN
2	refinement	SANDER(AMBER)	4.1	PEARLMAN,CASE,CALDWELL,ROSS,CHEATHAM,FERGUSON,SEIBEL,SINGH,WEINER,KOLLMAN

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.