1LWM

Solution Structure of the Sequence-Non-Specific HMGB protein NHP6A


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY1 2mM 15N-labeled NHP6A90% H2O, 10% D2O or 100% D2O10 mM NaPO4, 100 mM NaCl5.5ambient293
23D_13C-separated_NOESY2mM 13C/15N-labeled NHP6A90% H2O, 10% D2O or 100% D2O10 mM NaPO4, 100 mM NaCl5.5ambient293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
NMR Refinement
MethodDetailsSoftware
simulated annealingThe structures are based on the same restraints as previously used in the 1999 structure 1CG7, but different a-helix hydrogen bond restraints were included. These are the same as those used to calculate the structure of the complex with SRY_DNA.XwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with acceptable covalent geometry,structures with the lowest energy
Conformers Calculated Total Number50
Conformers Submitted Total Number20
Representative Model1 (closest to the average,lowest energy)
Additional NMR Experimental Information
DetailsThis structure calculated using the same data as previously used in the 1999 structure 1CG7 but using new a-helix hydrogen bond restraints and XPLOR instead of DYANA.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR2.6Bruker
2processingXwinNMR2.6Bruker
3data analysisFelix2000MSI
4structure solutionX-PLOR3.1Brunger
5refinementX-PLOR3.1Brunger