☰ Navigation Tabs
Structure of a Functional Unit from Octopus Hemocyanin
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 277 PEG 3350, LITHIUM SULFATE, TRIS, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.54 50
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 92.86 α = 90 b = 168.39 β = 90 c = 58.29 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 279 IMAGE PLATE FUJI 1989-06-01 M MAD 2 1 x-ray 298 IMAGE PLATE FUJI 1994-06-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE 1.3796,1.3779,1.2000 Photon Factory 2 SYNCHROTRON NSLS BEAMLINE X4A 0.98 NSLS X4A
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIRAS, combined with partial MAD phasing 2.3 10 2 39114 38644 1614 0.201 0.202 0.1903 0.262 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 24.29 x_angle_d 1.69 x_improper_angle_d 1.443 x_mcbond_it 0.09 x_bond_d 0.014
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6134 Nucleic Acid Atoms Solvent Atoms 296 Heterogen Atoms 163
Software Software Software Name Purpose DENZO data reduction ROTAVATA data reduction MADSYS phasing MLPHARE phasing X-PLOR refinement CCP4 data scaling ROTAVATA data scaling