1IV7

Crystal Structure of Single Chain Monellin


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1MICROBATCH7.2277PEG8000, potassium phosphate, pH 7.2, micro batch, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.2645.51

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 60.65α = 90
b = 36.26β = 91.1
c = 46.38γ = 90
Symmetry
Space GroupP 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray277IMAGE PLATERIGAKU RAXIS IIC1998-03-19MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RU200H1.5418

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.860940.0671811317026

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1MOL1.82151611987093.160.202020.199830.24084RANDOM31.272
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.620.540.350.29
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg20.056
r_scangle_it7.414
r_dihedral_angle_1_deg4.955
r_scbond_it4.625
r_mcangle_it2.675
r_angle_refined_deg2.232
r_mcbond_it1.493
r_nbd_refined0.267
r_symmetry_vdw_refined0.253
r_symmetry_hbond_refined0.228
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg20.056
r_scangle_it7.414
r_dihedral_angle_1_deg4.955
r_scbond_it4.625
r_mcangle_it2.675
r_angle_refined_deg2.232
r_mcbond_it1.493
r_nbd_refined0.267
r_symmetry_vdw_refined0.253
r_symmetry_hbond_refined0.228
r_xyhbond_nbd_refined0.156
r_chiral_restr0.154
r_bond_refined_d0.027
r_gen_planes_refined0.012
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1596
Nucleic Acid Atoms
Solvent Atoms106
Heterogen Atoms

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
X-PLORmodel building
REFMACrefinement
X-PLORphasing