☰ Navigation Tabs
SOLUTION STRUCTURE OF C-TERMINAL DOMAIN OF POLY(A) BINDING PROTEIN FROM SACCHAROMYCES CEREVISIAE
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D_NOESY 3mM protein, 50mM phosphate buffer, 0.1M NaCl, 1mM NaN3 90% H2O/10% D2O 0.2 6.3 ambient 303 2 2D_NOESY 3mM protein, 50mM phosphate buffer, 0.1M NaCl, 1mM NaN3 100% D2O 0.2 6.3 ambient 303 3 3D_15N-separated_NOESY 3mM protein U-15N, 50mM phosphate buffer, 0.1M NaCl, 1mM NaN3 90% H2O/10% D2O 0.2 6.3 ambient 303 4 3D_13C-separated_NOESY 3mM protein U-15N,13C, 50mM phosphate buffer, 0.1M NaCl, 1mM NaN3 100% D2O 0.2 6.3 ambient 303
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 500 2 Varian UNITYPLUS 750
NMR Refinement Method Details Software simulated annealing The structures are based on 972 NOE distance constraints, 69 dihedral angles
constraints and 40 hydrogen bonds. XwinNMR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 30 Representative Model 1 (lowest energy)
Additional NMR Experimental Information Details The structure was determined using standard triple-resonance and homonuclear
techniques. The N-terminal sequence GPLGS is a cloning artifact.
Computation: NMR Software # Classification Version Software Name Author 1 collection XwinNMR 2.1 Bruker 2 processing Gifa 4.31 Delsuc 3 data analysis XEASY 1.3.13 Wuthrich 4 structure solution CNS 0.9 Brunger 5 structure solution ARIA 0.9 Nilges 6 refinement CNS 0.9 Brunger