1HZ0

NMR STRUCTURE OF THE 2-AMINO-1-METHYL-6-PHENYLIMIDAZO[4,5-B]PYRIDINE (PHIP) C8-DEOXYGUANOSINE ADDUCT IN DUPLEX DNA


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY9.1 mg of [PhIP]dG.dC 11mer duplex in 600 ul of 10 mM Na2PO4 buffer100% D2O0.1 M NaCl7.00ambient298
22D NOESY9.1 mg of [PhIP]dG.dC 11mer duplex in 600 ul of 10 mM Na2PO4 buffer100% D2O0.1 M NaCl7.00ambient293
32D NOESY9.1 mg of [PhIP]dG.dC 11mer duplex in 600 ul of 10 mM Na2PO4 buffer90% H2O/10% D2O0.1 M NaCl7.00ambient274
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
restrainted torsion angle minimizationsA total of 266 NOE-derived distance constraints were used in the calculationsVNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number48
Conformers Submitted Total Number6
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsThis structure was determined using standard 2D homonuclear techniques
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMR6.0Varian
2data analysisFelix97MSI
3structure solutionDUPLEXnoneHingerty and Broyde
4refinementDUPLEXnoneHingerty and Broyde