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RAT OESTROGEN RECEPTOR BETA LIGAND-BINDING DOMAIN IN COMPLEX WITH PURE ANTIOESTROGEN ICI164,384
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1QKN
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.5 7.0% (W/V) PEG 2000 MONOMETHYL ETHER 0.0035M NICKEL CHLORIDE 0.035M TRIS-HCL, PH 8.5
Crystal Properties Matthews coefficient Solvent content 2.22 44
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 60.38 α = 90 b = 82.67 β = 90 c = 106.34 γ = 90
Symmetry Space Group I 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 1999-02-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-4 ESRF ID14-4
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 20 98.2 0.06 14.4 4 12201 -3 48.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.34 98.6 0.326 2 4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1QKN 2.3 20 11328 587 98.2 0.21966 0.2126 0.25051 0.244 RANDOM 53
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 35 p_staggered_tor 17.7 p_scangle_it 3.301 p_mcangle_it 2.928 p_scbond_it 2.075 p_mcbond_it 1.839 p_planar_tor 1.7 p_multtor_nbd 0.184 p_singtor_nbd 0.182 p_xyhbond_nbd 0.148
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 35 p_staggered_tor 17.7 p_scangle_it 3.301 p_mcangle_it 2.928 p_scbond_it 2.075 p_mcbond_it 1.839 p_planar_tor 1.7 p_multtor_nbd 0.184 p_singtor_nbd 0.182 p_xyhbond_nbd 0.148 p_chiral_restr 0.121 p_planar_d 0.039 p_angle_d 0.035 p_bond_d 0.012 p_plane_restr 0.011 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1582 Nucleic Acid Atoms Solvent Atoms 46 Heterogen Atoms 51
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling AMoRE phasing CCP4 phasing REFMAC refinement