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Tungstate bound complex Dimop domain of ModE from E.coli
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1B9N PDB ENTRY 1B9N
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.6 pH 7.60
Crystal Properties Matthews coefficient Solvent content 2.19 43.77
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 72.23 α = 90 b = 73.23 β = 90 c = 49.79 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS IV MIRRORS M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 30 97.9 0.49 27.8 9 20410 22
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1B9N 1.9 20 18899 1018 97.9 0.17 0.225 RANDOM 34.2
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 30.045 p_staggered_tor 11.759 p_planar_tor 3.287 p_scangle_it 2.799 p_mcangle_it 2.573 p_scbond_it 1.747 p_mcbond_it 1.646 p_xhyhbond_nbd 0.257 p_multtor_nbd 0.232 p_singtor_nbd 0.179
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 30.045 p_staggered_tor 11.759 p_planar_tor 3.287 p_scangle_it 2.799 p_mcangle_it 2.573 p_scbond_it 1.747 p_mcbond_it 1.646 p_xhyhbond_nbd 0.257 p_multtor_nbd 0.232 p_singtor_nbd 0.179 p_xyhbond_nbd 0.126 p_chiral_restr 0.12 p_plane_restr 0.036 p_planar_d 0.031 p_angle_d 0.03 p_bond_d 0.011 p_angle_deg p_hb_or_metal_coord p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2094 Nucleic Acid Atoms Solvent Atoms 312 Heterogen Atoms 11
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling AMoRE phasing