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CRYSTAL STRUCTURE OF THE OXIDIZED FORM OF NI-FE HYDROGENASE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.6 pH 6.6
Crystal Properties Matthews coefficient Solvent content 2.28 46.08
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 63.6 α = 89.8 b = 93.9 β = 102.9 c = 69.2 γ = 90.8
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 IMAGE PLATE 1992-09-23 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON LURE BEAMLINE DW32 LURE DW32
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.85 23.5 85.5 0.086 3.7 31053
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.85 3 47.6 0.207 1.6
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION MIR WITH AVERAGING 2.85 8 29660 85.3 19
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 34.4 p_staggered_tor 25.3 p_planar_tor 7.9 p_angle_deg 3.4 p_scangle_it 2.07 p_mcangle_it 1.54 p_scbond_it 1.28 p_mcbond_it 0.9 p_multtor_nbd 0.271 p_xyhbond_nbd 0.231
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 34.4 p_staggered_tor 25.3 p_planar_tor 7.9 p_angle_deg 3.4 p_scangle_it 2.07 p_mcangle_it 1.54 p_scbond_it 1.28 p_mcbond_it 0.9 p_multtor_nbd 0.271 p_xyhbond_nbd 0.231 p_singtor_nbd 0.213 p_chiral_restr 0.169 p_planar_d 0.066 p_angle_d 0.032 p_bond_d 0.012 p_plane_restr 0.01 p_hb_or_metal_coord p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 12288 Nucleic Acid Atoms Solvent Atoms 22 Heterogen Atoms 56
Software Software Software Name Purpose MOSFLM data reduction SCALKB/KBAPLY data reduction X-PLOR model building PROLSQ refinement X-PLOR refinement BIOMOL data scaling X-PLOR phasing