1EXL

STRUCTURE OF AN 11-MER DNA DUPLEX CONTAINING THE CARBOCYCLIC NUCLEOTIDE ANALOG: 2'-DEOXYARISTEROMYCIN


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY280 OD260 DNA; 10 mM phosphate buffer; 50 mM NaCl and 1mM EDTA90% H2O, 10% D2O (v/v); 99.96% D2O50 mM NaCl6.91 atm278
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA500
2VarianINOVA600
NMR Refinement
MethodDetailsSoftware
molecular dynamics; matrix relaxationFelix
NMR Ensemble Information
Conformer Selection Criteriaall calculated structures submitted, back calculated data agree with experimental NOESY spectrum
Conformers Calculated Total Number30
Conformers Submitted Total Number30
Representative Model15 (minimized average structure)
Additional NMR Experimental Information
DetailsThis structure was determined using standard 2D homonuclear techniques
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingFelix95MSI
2data analysisMARDIGRAS2.0Borgias,B.A. & James, T.L.
3structure solutionX-PLOR3.8Brunger, A.
4refinementX-PLOR3.8Brunger, A.