1DUP

DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDO HYDROLASE (D-UTPASE)


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.7655.36

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 86.61α = 90
b = 86.61β = 90
c = 62.27γ = 120
Symmetry
Space GroupH 3

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION1.9101359798.90.15
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor31.7
p_staggered_tor15.6
p_scangle_it7.8
p_scbond_it5.6
p_mcangle_it3.4
p_planar_tor2.8
p_mcbond_it2.4
p_multtor_nbd0.263
p_xhyhbond_nbd0.194
p_singtor_nbd0.186
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor31.7
p_staggered_tor15.6
p_scangle_it7.8
p_scbond_it5.6
p_mcangle_it3.4
p_planar_tor2.8
p_mcbond_it2.4
p_multtor_nbd0.263
p_xhyhbond_nbd0.194
p_singtor_nbd0.186
p_chiral_restr0.18
p_planar_d0.047
p_angle_d0.044
p_bond_d0.017
p_plane_restr0.015
p_angle_deg
p_hb_or_metal_coord
p_xyhbond_nbd
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1027
Nucleic Acid Atoms
Solvent Atoms123
Heterogen Atoms

Software

Software
Software NamePurpose
ARP/wARPmodel building
PROLSQrefinement