1DIT

COMPLEX OF A DIVALENT INHIBITOR WITH THROMBIN


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.5551.83

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 70.9α = 90
b = 72.2β = 100.9
c = 73.2γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.31075142382

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION2.3721302275
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor30
p_staggered_tor22
p_scangle_it4.1
p_planar_tor3
p_scbond_it2
p_mcangle_it1.8
p_mcbond_it1.4
p_multtor_nbd0.28
p_xyhbond_nbd0.25
p_singtor_nbd0.22
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor30
p_staggered_tor22
p_scangle_it4.1
p_planar_tor3
p_scbond_it2
p_mcangle_it1.8
p_mcbond_it1.4
p_multtor_nbd0.28
p_xyhbond_nbd0.25
p_singtor_nbd0.22
p_planar_d0.05
p_angle_d0.035
p_plane_restr0.023
p_bond_d0.02
p_chiral_restr0.015
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2365
Nucleic Acid Atoms
Solvent Atoms165
Heterogen Atoms

Software

Software
Software NamePurpose
PROLSQrefinement