1AC9 | pdb_00001ac9

SOLUTION STRUCTURE OF A DNA DECAMER CONTAINING THE ANTIVIRAL DRUG GANCICLOVIR: COMBINED USE OF NMR, RESTRAINED MOLECULAR DYNAMICS, AND FULL RELAXATION REFINEMENT, 6 STRUCTURES

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	NOESY				6.8		283
2	TOCSY				6.8		283
3	HETEROTOCSY				6.8		283
4	COSY				6.8		283
5	DQFCOSY				6.8		283
6	HSQC				6.8		283
7	HMQC				6.8		283

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	UNITYPLUS	600

NMR Refinement
Method	Details	Software
RESTRAINED MOLECULAR DYNAMICS	SIX TOTAL STRUCTURES DETERMINED (3 FROM CANONICAL A-TYPE DNA AND 3 FROM CANONICAL B-TYPE DNA). ALL STRUCTURES WERE GENERATED WITH DIFFERENT STARTING RANDOM NUMBER SEEDS. STRUCTURES GENERATED FROM A-TYPE: MODELS 1 - 3 STRUCTURES GENERATED FROM B-TYPE: MOD ELS 4 - 6	X-PLOR

NMR Ensemble Information
Conformer Selection Criteria	LOWEST ENERGY STRUCTURE
Conformers Calculated Total Number	6
Conformers Submitted Total Number	6

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	X-PLOR	3.1	BRUNGER
2	structure solution	FELIX95.0
3	structure solution	X-PLOR