1A7R

FV FRAGMENT OF MOUSE MONOCLONAL ANTIBODY D1.3 (BALB/C, IGG1, K) VARIANT CHAIN L GLU81->ASP


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.3347.25

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 90.245α = 90
b = 90.245β = 90
c = 56.235γ = 90
Symmetry
Space GroupP 43 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray269IMAGE PLATEMARRESEARCH1992-12-19M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1213.8994.70.084.39688015.94
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
22.0543.30.2972.6

Refinement

Statistics
Diffraction IDStructure Solution MethodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTPDB ENTRY 1VFA2.01614719147190.1718.25
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor19.1
p_special_tor15
p_transverse_tor13.8
p_scangle_it3.584
p_planar_tor2.61
p_scbond_it2.52
p_mcangle_it1.96
p_mcbond_it1.305
p_multtor_nbd0.176
p_singtor_nbd0.164
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor19.1
p_special_tor15
p_transverse_tor13.8
p_scangle_it3.584
p_planar_tor2.61
p_scbond_it2.52
p_mcangle_it1.96
p_mcbond_it1.305
p_multtor_nbd0.176
p_singtor_nbd0.164
p_chiral_restr0.145
p_xyhbond_nbd0.138
p_planar_d0.051
p_angle_d0.05
p_bond_d0.019
p_plane_restr0.016
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1721
Nucleic Acid Atoms
Solvent Atoms111
Heterogen Atoms

Software

Software
Software NamePurpose
MOSFLMdata reduction
AGROVATA/ROTAVATAdata reduction
ALMN/CCP4model building
CCP4refinement
Agrovatadata scaling
ROTAVATAdata scaling
CCP4phasing