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Crystal Structure of SmcL
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.8 298 PEG 8000, sodium citrate, sodium dihydrogen phosphate, sodium chloride, pH 4.8, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Crystal Properties Matthews coefficient Solvent content 3.4 59
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 66.86 α = 90 b = 66.86 β = 90 c = 180.848 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 Mirrors 2005-01-05 M SINGLE WAVELENGTH 2 1
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX14.1 1.4880 SRS PX14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 30.68 99.4 0.063 0.063 18.8 5.7 37481 27
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 2 100 100 0.263 0.263 2.7 5.5 5409
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIRAS THROUGHOUT 1.9 30.67 37475 35586 1888 100 0.203 0.201 0.1988 0.233 0.2303 RANDOM 29.572
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.8 0.9 1.8 -2.7
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.752 r_dihedral_angle_4_deg 18.823 r_dihedral_angle_3_deg 13.897 r_dihedral_angle_1_deg 6.73 r_scangle_it 3.596 r_scbond_it 2.392 r_mcangle_it 1.636 r_angle_refined_deg 1.433 r_mcbond_it 0.981 r_nbtor_refined 0.308
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.752 r_dihedral_angle_4_deg 18.823 r_dihedral_angle_3_deg 13.897 r_dihedral_angle_1_deg 6.73 r_scangle_it 3.596 r_scbond_it 2.392 r_mcangle_it 1.636 r_angle_refined_deg 1.433 r_mcbond_it 0.981 r_nbtor_refined 0.308 r_nbd_refined 0.192 r_symmetry_hbond_refined 0.167 r_xyhbond_nbd_refined 0.156 r_symmetry_vdw_refined 0.148 r_chiral_restr 0.11 r_bond_refined_d 0.016 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2301 Nucleic Acid Atoms Solvent Atoms 244 Heterogen Atoms 11
Software Software Software Name Purpose SCALA data scaling SOLVE phasing RESOLVE phasing REFMAC refinement PDB_EXTRACT data extraction MOSFLM data reduction CCP4 data scaling