Structure of the globular head domain of the bundlin, BfpA, of the bundle-forming pilus of Enteropathogenic E.coli
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_13C-separated_NOESY | 0.5 mM BfpA U-15N,13C, 20 mM sodium phosphate buffer pH 5.2, 90%H20, 10% D2O | 90%H20, 10% D2O | no salt | 5.2 | normal | 303 | |
| 2 | 3D_15N-separated_NOESY | 0.5 mM BfpA U-15N,13C, 20 mM sodium phosphate buffer pH 5.2, 90%H20, 10% D2O | 90%H20, 10% D2O | no salt | 5.2 | normal | 303 | |
| 3 | 3D HBHA(CBCACO)NH | 0.5 mM BfpA U-15N,13C, 20 mM sodium phosphate buffer pH 5.2, 90%H20, 10% D2O | 90%H20, 10% D2O | no salt | 5.2 | normal | 303 | |
| 4 | 3D HCCH-TOCSY | 0.5 mM BfpA U-15N,13C, 20 mM sodium phosphate buffer pH 5.2, 90%H20, 10% D2O | 90%H20, 10% D2O | no salt | 5.2 | normal | 303 | |
| 5 | 3D (H)CC(CO)NH-TOCSY | 0.5 mM BfpA U-15N,13C, 20 mM sodium phosphate buffer pH 5.2, 90%H20, 10% D2O | 90%H20, 10% D2O | no salt | 5.2 | normal | 303 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX | 500 |
| 2 | Varian | INOVA | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| Simulated annealing with NMR restraints using ARIA | 577 Ambiguous and 2277 unambiguous NOE restraints, 86 TALOS constraints and 38 hydrogen bonds were imposed during ARIA structure calculations. | NMRPipe |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with acceptable covalent geometry, structures with the least restraint violations, structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 12 |
| Representative Model | 12 (least number of violations, lowest energy) |
| Additional NMR Experimental Information | |
|---|---|
| Details | Hydrogen-exchange experiments |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | NMRPipe | Delaglio, Grezsiek, Bax | |
| 2 | data analysis | NMRView | 5.0.4 | Johnson and Blevins |
| 3 | refinement | ARIA | 1.2 | Linge and Nilges |














