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STRUCTURE OF B28 ASP INSULIN IN COMPLEX WITH PHENOL
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1ZEH B28ASP INSULIN WITH M-CRESOL DIMER
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 batch method 6.5 BATCH METHOD, COMPOSITION OF CRYSTALLISATION SOLUTION 3.5 MG INSULIN + 0.5 ML 0.02M HCL + 0.05 ML 0.12M ZINC ACETATE + 0.25 ML 0.2M TRI-SODIUM CITRATE + 0.2 ML 2.5% (W/V) PHENOL IN ETHANOL + 60 MG NACL, pH 6.5, batch method
Crystal Properties Matthews coefficient Solvent content 1.95 40
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 77.73 α = 90 b = 77.73 β = 90 c = 39.16 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 120 IMAGE PLATE MARRESEARCH M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 14.7 98.9 0.023 6.5 11469 15
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.6 1.63 96.7 0.038
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FREE R B28ASP INSULIN WITH M-CRESOL DIMER 1.6 14.7 11469 98.9 0.145 0.192 5.0 20.8
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 15.3 p_staggered_tor 11.1 p_planar_tor 5.7 p_scangle_it 3.402 p_mcangle_it 2.363 p_scbond_it 2.314 p_mcbond_it 1.589 p_multtor_nbd 0.278 p_singtor_nbd 0.165 p_xyhbond_nbd 0.134
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 15.3 p_staggered_tor 11.1 p_planar_tor 5.7 p_scangle_it 3.402 p_mcangle_it 2.363 p_scbond_it 2.314 p_mcbond_it 1.589 p_multtor_nbd 0.278 p_singtor_nbd 0.165 p_xyhbond_nbd 0.134 p_chiral_restr 0.084 p_planar_d 0.034 p_angle_d 0.032 p_plane_restr 0.027 p_bond_d 0.014 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 812 Nucleic Acid Atoms Solvent Atoms 106 Heterogen Atoms 25
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement