1ZAE
Solution structure of the functional domain of phi29 replication organizer p16.7c
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 400UM P16.7c, 200MM NACL, 10MM SODIUM PHOSPHATE BUFFER, 4MM DTT AT PH 5.0 | 90% H2O/10% D2O | 200mM NACL | 5 | ambient | 308 | |
2 | 3D_13C-separated_NOESY | 400UM P16.7c, 200MM NACL, 10MM SODIUM PHOSPHATE BUFFER, 4MM DTT AT PH 5.0 | 90% H2O/10% D2O | 200mM NACL | 5 | ambient | 308 | |
3 | 3D_15N-separated_NOESY | 400UM P16.7c, 200MM NACL, 10MM SODIUM PHOSPHATE BUFFER, 4MM DTT AT PH 5.0 | 90% H2O/10% D2O | 200mM NACL | 5 | ambient | 308 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
2 | Bruker | DMX | 600 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics, molecular dynamics | DYANA |
NMR Ensemble Information | |
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Conformer Selection Criteria | all calculated structures submitted |
Conformers Calculated Total Number | 25 |
Conformers Submitted Total Number | 25 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | DYANA | 1.4 | Gunter, P. |
2 | refinement | Amber | 5.0 | Kollman, P. |