Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
PLUNGED INTO ETHANE AT LIQUID NITROGEN TEMPERATURE
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
4704
Reported Resolution (Å)
8
Resolution Method
Other Details
A B-FACTOR OF 589.46 WAS SET FOR ALL THE ATOMS BASED ON
THE EQUATION OF -4*LN(0.1*RESOLUTION2) TO MIMIC A
8 ANGSTROM RESOLUTION CRYOEM STRUCTURE. OCCU ...
A B-FACTOR OF 589.46 WAS SET FOR ALL THE ATOMS BASED ON
THE EQUATION OF -4*LN(0.1*RESOLUTION2) TO MIMIC A
8 ANGSTROM RESOLUTION CRYOEM STRUCTURE. OCCUPANCY OF
1.0 WAS SET FOR ALL ATOMS OF THE VIRAL CAPSID. OCCUPANCY
OF 0.80, 0.56, 0.24, 0.16, AND 0.08 WAS SET FOR ATOMS
OF ICAM-1 DOMAIN 1, 2, 3, 4, AND 5, RESPECTIVELY,
BASED ON THE FITTING RESULTS. SEE DETAILS IN THE CITATION.
Refinement Type
Symmetry Type
POINT
Point Symmetry
I
Map-Model Fitting and Refinement
Id
1 (1IAM, 1Z7S)
Refinement Space
REAL
Refinement Protocol
RIGID BODY FIT
Refinement Target
BEST SUMF VALUE FIT USING THE PROGRAM EMFIT
Overall B Value
Fitting Procedure
Details
REFINEMENT PROTOCOL--RIGID BODY
Data Acquisition
Detector Type
KODAK SO-163 FILM
Electron Dose (electrons/Å**2)
26
Imaging Experiment
1
Date of Experiment
2001-03-15
Temperature (Kelvin)
100
Microscope Model
FEI/PHILIPS CM300FEG/T
Minimum Defocus (nm)
700
Maximum Defocus (nm)
3000
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS
2
Imaging Mode
BRIGHT FIELD
Specimen Holder Model
Nominal Magnification
45000
Calibrated Magnification
47000
Source
FIELD EMISSION GUN
Acceleration Voltage (kV)
300
Imaging Details
SAMPLES WERE MAINTAINED AT LIQUID NITROGEN TEMPERATURES IN THE ELECTRON MICROSCOPE.