1Z66
NMR solution structure of domain III of E-protein of tick-borne Langat flavivirus (no RDC restraints)
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | C13 edited NOESYHSQC | 0.7mM Langat E-protein domain III, U-15N, 13C, 20mM Bis Tris, 10mM NaCl, 95% H2O, 5% D2O | 95% H2O, 10% D2O | 10mM NaCl | 6.2 | ambient | 298 | |
2 | N15 edited NOESYHSQC | 0.7mM Langat E-protein domain III, U-15N, 13C, 20mM Bis Tris, 10mM NaCl, 95% H2O, 5% D2O | 95% H2O, 10% D2O | 10mM NaCl | 6.2 | ambient | 298 | |
3 | HNHA | 0.7mM Langat E-protein domain III, U-15N, 13C, 20mM Bis Tris, 10mM NaCl, 95% H2O, 5% D2O | 95% H2O, 10% D2O | 10mM NaCl | 6.2 | ambient | 298 | |
4 | HNCO-3J | 0.7mM Langat E-protein domain III, U-15N, 13C, 20mM Bis Tris, 10mM NaCl, 95% H2O, 5% D2O | 95% H2O, 10% D2O | 10mM NaCl | 6.2 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
2 | Varian | INOVA | 750 |
3 | Bruker | AVANCE | 800 |
4 | Bruker | AVANCE | 600 |
5 | Bruker | AVANCE | 500 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry and simulated annealing | ARIA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 500 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
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Details | This structure was determined using standard 2D and 3D heteronuclear NMR experiments. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | ARIA | 2.0 | |
2 | structure solution | CNS | 1.1 | |
3 | refinement | CNS | 1.1 |