Solution Structure of the Cytotoxic RC-RNase 3 with a Pyroglutamate Residue at the N-terminus
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_13C-separated_NOESY | 2mM RC-RNase 3, U-15N,13C; 20mM phosphate buffer; 90% H2O, 10% D2O | 90% H2O/10% D2O | 20 mM | 3.5 | ambient | 310 | |
| 2 | 3D_15N-separated_NOESY | 2mM RC-RNase 3, U-15N,13C; 20mM phosphate buffer; 90% H2O, 10% D2O | 90% H2O/10% D2O | 20 mM | 3.5 | ambient | 310 | |
| 3 | IPAP_1H, 15N_HSQC | 2mM RC-RNase 3, U-15N,13C; 20mM phosphate buffer; 90% H2O, 10% D2O | 90% H2O, 10% D2O, 5mg/ml phage pf1 | 20 mM | 3.5 | ambient | 310 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | XwinNMR | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | XwinNMR | 3.5 | |
| 2 | processing | NMRPipe | ||
| 3 | data analysis | NMRView | 5.0 | |
| 4 | structure solution | X-PLOR | 3.851 | |
| 5 | refinement | X-PLOR | 3.851 | |














