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aldo-keto reductase AKR11C1 from Bacillus halodurans (holo form)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 293 (NH4)2SO4, Li2SO4, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.4 48.4
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 75.122 α = 90 b = 87.543 β = 90 c = 105.434 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2004-06-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA 0.97934 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.3 38.71 99.4 0.085 0.085 9.38 5.4 169631 169631 -3 20.6
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.3 1.4 99 0.506 0.506 3.5 4.3 33318
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION isomorphous THROUGHOUT 1.3 67.42 169629 161130 8499 99.36 0.15339 0.15172 0.1514 0.18534 0.185 RANDOM 20.057
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.15 0.62 -0.46
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.541 r_dihedral_angle_3_deg 12.533 r_dihedral_angle_4_deg 12.134 r_sphericity_free 8.9 r_scangle_it 6.622 r_sphericity_bonded 6.147 r_dihedral_angle_1_deg 5.629 r_scbond_it 5.072 r_mcangle_it 3.534 r_rigid_bond_restr 3.312
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.541 r_dihedral_angle_3_deg 12.533 r_dihedral_angle_4_deg 12.134 r_sphericity_free 8.9 r_scangle_it 6.622 r_sphericity_bonded 6.147 r_dihedral_angle_1_deg 5.629 r_scbond_it 5.072 r_mcangle_it 3.534 r_rigid_bond_restr 3.312 r_mcbond_it 2.458 r_angle_refined_deg 1.715 r_nbtor_refined 0.313 r_nbd_refined 0.225 r_symmetry_hbond_refined 0.212 r_symmetry_vdw_refined 0.208 r_xyhbond_nbd_refined 0.189 r_chiral_restr 0.103 r_bond_refined_d 0.015 r_gen_planes_refined 0.01
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4718 Nucleic Acid Atoms Solvent Atoms 683 Heterogen Atoms 145
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction MAR345 data collection XDS data scaling