1YJU

Solution structure of the apo form of the sixth soluble domain of Menkes protein

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D_15N-separated_NOESY	0.8mM 15N labeled sample; 5mM DTT; 100mM phosphate buffer	90% H2O/10% D2O	100mM phosphate buffer	7	ambient	298
2	CBCANH; CBCACONH; HNCO; HNCACO	0.8mM 15N 13C labeled sample; 5mM DTT; 100mM phosphate buffer	90% H2O/10% D2O
3	2D NOESY	1.0mM unlabeled sample; 5mM DTT; 100mM phosphate buffer	90% H2O/10% D2O
4	2D TOCSY	1.0mM unlabeled sample; 5mM DTT; 100mM phosphate buffer	90% H2O/10% D2O
5	HNHA	0.8mM 15N labeled sample; 5mM DTT; 100mM phosphate buffer	90% H2O/10% D2O	100mM phosphate buffer	7	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	900
2	Bruker	AVANCE	500

NMR Refinement
Method	Details	Software
torsion angle dynamics coupled with simulated annealing followed by restrained energy minimization	the structures were based on a total of 1992 meaningful distance constraints, 81 dihedral angle restraints	XwinNMR

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	300
Conformers Submitted Total Number	30
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	XwinNMR
2	data analysis	CARA	1.2	Keller, Rochus (2004): the computer aided resonance tutorial ISBN 3-85600-112-3, first edition
3	structure solution	DYANA	1.5
4	refinement	Amber	5.0

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.