1YBJ

Structural and Dynamics studies of both apo and holo forms of the hemophore HasA


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1HNHA1.8mM HasA 15N20mM sodium phosphate buffer, pH5.6; 90% H2O/10% D2020mM sodium phosphate buffer5.6ambient303
23D_15N-separated_NOESY1.9mM HasA 15N,13C20mM sodium phosphate buffer, pH5.6; 90% H2O/10% D2020mM sodium phosphate buffer5.6ambient303
33D_13C-separated_NOESY1.9mM HasA 15N,13C20mM sodium phosphate buffer, pH5.6; 90% H2O/10% D2020mM sodium phosphate buffer5.6ambient303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA750
2VarianINOVA500
NMR Refinement
MethodDetailsSoftware
simulated annealingStructures are based on a total of 3537 distance restraints (where 3145 were unambiguous and 392 ambiguous),111 phi torsion angles and 34 hydrogen bonds.VNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number20
Conformers Submitted Total Number10
Representative Model10 (lowest energy)
Additional NMR Experimental Information
DetailsH-bond constraints according to the amide proton-deuterium exchange measurements (15N HSQC experiments)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMR6.1c
2processingNMRPipeF. Delaglio, S. Grzesiek, G. W. Vuister, G. Zhu, J. Pfeifer and A. Bax
3data analysisXEASY1.3.13Bartels, C., Xia, T.H., Billeter, M., Guntert, P., Wuthrich, K.
4structure solutionARIA/CNS2.0alphaLinge, J., Nilges, M., Habeck, M., Rieping, W.
5refinementARIA/CNS2.0alphaLinge, J., Nilges, M., Habeck, M., Rieping, W.